Research output per year
Research output per year
Accepting PhD Students
Dr Chaimaa Tarzi is a Lecturer in Computing & Games at Teesside University, within the Department of Computing & Games. She holds a PhD in Computer Science from Teesside University (2025) and an MSc in Software Engineering (2019) from ENSIAS Rabat, Morocco. Her early academic background is rooted in Mathematics and Physics, having completed the Classe Préparatoire Scientifique aux Grandes Écoles in Nîmes, France (2014).
Chaimaa’s research lies at the intersection between community metabolic modelling, computational biology, and machine learning, with a strong focus on understanding the metabolic behaviour of microbial communities in health and disease. In collaboration with Complement Genomics Ltd, her work investigates biofilm dynamics in mixed microbial populations, aiming to reconstruct pairwise genome-scale metabolic (GEM) models from metagenome-assembled genomes (MAGs).
Her current research explores community-level modelling frameworks to refine metabolic networks and elucidate pairwise interactions in disease contexts. By integrating machine learning and explainable AI approaches, she develops predictive models to enhance GEM reconstruction, interpret metabolic fluxes, and improve the coverage and robustness of biological datasets.
Beyond metabolic modelling, Chaimaa’s work extends to protein modelling and structural bioinformatics, where she applies molecular docking and 3D structure reconstruction techniques to investigate the pathophysiological roles of proteins in cancer and infectious diseases. Her interdisciplinary expertise bridges software engineering, AI, and mathematical modelling, contributing to the development of innovative computational tools for biological and biomedical research.
Her work is being extended to broader disease and cancer research contexts, demonstrating the translational impact of computational modelling in healthcare.
External Roles and Professional Activities
PhD, Towards genome-scale metabolic modeling of microbial communities and multi-omics data integration to predict human diseases states
Award Date: 2 Apr 2025
Master, Software Engineering, Ecole Nationale Supérieure d’Informatique et d’Analyse des Systèmes
Award Date: 31 Jul 2019
Research output: Contribution to journal › Article › peer-review
Research output: Contribution to journal › Review article › peer-review
Research output: Contribution to journal › Article › peer-review
Research output: Contribution to journal › Article › peer-review
Chaimaa, T. (Creator), Zenodo, 23 Oct 2024
DOI: 10.5281/zenodo.13984251, https://zenodo.org/records/13984251
Dataset
Chaimaa, T. (Creator), Zenodo, 6 Jul 2024
DOI: 10.5281/zenodo.12675542, https://zenodo.org/records/12675542
Dataset
Student thesis: Doctoral Thesis