Multi objective design for bacterial communication networks

Claudio Angione, Giovanni Carapezza, Jole Costanza, Pietro Lio, Giuseppe Nicosia

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearch

Abstract

In this paper we discuss the bacterial network communication design with respect to metabolic information processing. The potentialities of designing routing network schemes based on bacteria motility will depend on the genes coding for the intracellular and intercellular communication molecular devices. An additional element is given by the 'mobilome' which is related to horizontal gene transfer. First, by using a multi-objective optimization procedure, we search for the optimal trade off between energy production, which is a requirement for the motility, and the biomass growth, which is related to the overall survival and fitness of the bacterium. We use flux balance analysis of genome-scale biochemical network of Escherichia coli k-13 MG1655. Then, as a second case study we analyze the electric properties and biomass trade-off of the bacterium Geobacter sulfurreducens. This bacterium is usually grown on a graphite electrode. It constructs an electric biofilm where electrons move across the nanowires. Geobacter species produce higher current densities than any other known organism. Our methodology could estimate the evolutionary potential and help in designing optimal multi scale properties from networks to behavior. Moreover, we point to genetic design and synthetic biology as key areas to develop bacterial nano communication networks.

Original languageEnglish
Title of host publication2013 IEEE International Conference on Communications Workshops, ICC 2013
Pages813-817
Number of pages5
DOIs
Publication statusPublished - 27 Dec 2013
Event2013 IEEE International Conference on Communications Workshops - Budapest, Hungary
Duration: 9 Jun 201313 Jun 2013

Conference

Conference2013 IEEE International Conference on Communications Workshops
Abbreviated titleICC 2013
CountryHungary
CityBudapest
Period9/06/1313/06/13

Fingerprint

Telecommunication networks
Bacteria
Biomass
Genes
Gene transfer
Graphite electrodes
Network routing
Biofilms
Multiobjective optimization
Escherichia coli
Nanowires
Electric properties
Current density
Fluxes
Electrons
Communication

Cite this

Angione, C., Carapezza, G., Costanza, J., Lio, P., & Nicosia, G. (2013). Multi objective design for bacterial communication networks. In 2013 IEEE International Conference on Communications Workshops, ICC 2013 (pp. 813-817). [6649345] https://doi.org/10.1109/ICCW.2013.6649345
Angione, Claudio ; Carapezza, Giovanni ; Costanza, Jole ; Lio, Pietro ; Nicosia, Giuseppe. / Multi objective design for bacterial communication networks. 2013 IEEE International Conference on Communications Workshops, ICC 2013. 2013. pp. 813-817
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Angione, C, Carapezza, G, Costanza, J, Lio, P & Nicosia, G 2013, Multi objective design for bacterial communication networks. in 2013 IEEE International Conference on Communications Workshops, ICC 2013., 6649345, pp. 813-817, 2013 IEEE International Conference on Communications Workshops, Budapest, Hungary, 9/06/13. https://doi.org/10.1109/ICCW.2013.6649345

Multi objective design for bacterial communication networks. / Angione, Claudio; Carapezza, Giovanni; Costanza, Jole; Lio, Pietro; Nicosia, Giuseppe.

2013 IEEE International Conference on Communications Workshops, ICC 2013. 2013. p. 813-817 6649345.

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearch

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Angione C, Carapezza G, Costanza J, Lio P, Nicosia G. Multi objective design for bacterial communication networks. In 2013 IEEE International Conference on Communications Workshops, ICC 2013. 2013. p. 813-817. 6649345 https://doi.org/10.1109/ICCW.2013.6649345